Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922253.1_cds_XP_016471080.1_63460
CDS Infomation

[gene=LOC107793272] [db_xref=GeneID:107793272] [protein=glucan endo-1,3-beta-D-glucosidase-like isoform X2] [protein_id=XP_016471080.1] [location=join(36552..36621,37093..37467,38275..38564,39639..39962,40520..40703,40810..40865,41427..41483)] [gbkey=CDS]
Sequence

ATGGCTACACAAAAGCTTTCGAGTTTCTTCCTTATTTTCCTTGTTTTATTGCAATCTCTT
TCTTCCGCAGAGTCTCAAGCTTTTATCGGCGTTAACTACGGACAACTCGCCGATAACCTC
CCGCCGGTGACGGAGACGGTGAAGCTCATTCAGTCGACGAGGATTGAGAAGGTGAGGTTG
TATGGGGCGGATCCGGCGATTATAAAAGCGTTGGCGAATACCGGCATTGGAATTGTGATC
GGCGCTGCTAATGGTGATATCCCAGCGCTTGCATCCGACCCGAATTACGCGGGCCAATGG
GTTAATTCTAATGTGTTGGCTTATTATCCGGCGAGTAAGATTATTGTTGTTACTGTCGGT
AATGAAGTCGTGACCTCAGGAGATCAGAACCTTATTCCTCAACTTTTGCCGGCCATGCAA
AATGTCCAAAATGCCCTTAATGCTGCTTCCCTCGGTGGGAAAATCAAGGTATCAACAGTA
CACGCCATGTCCATTTTGTCTCAGTCCGACCCGCCTTCTTCCGGGTTATTCAGTCCAGTA
TTTGGAGACACGCTGAAAGCTCTGCTACAATTTCACAAGGAAAATGGTTCACCTTTGATG
ATCAATCCATACCCATTCTTTGCATATCAGAGTGATCCAAGACCTGAAACCTTGGCATTC
TGTCTCTTCCAACCAAATGCTGGCCGGGTCGACTCAGGATCCGGTATCAAATACATGAAC
ATGTTTGATGCACAGGTTGATGCTATACATTCTGCCCTGAATGCATGGGGATTCAAGGAA
GTTCAAATTGTGGTTGCAGAGACAGGGTGGCCATACAAGGGAGACCCAAATGAAGTAGGC
CCAAGTGTGGATAATGCAAAAGCTTATAACGGTAACTTGATAAACCACTTGAGGTCTATG
GTTGGCACTCCATTGATGCCTGGCATATCTGTTGATACCTATATATTTGCCCTCTATGAT
GAGGATTTGAAGCCTGGGCCTGGCTCGGAACGCTCATTTGGACTTTTCAAACCTGATCTT
TCTGTGACATATGACGTTGGCCTCTCAAAAAATGCGCAGACTCCTACAGCTCCAGTAACT
CCAGTGAGCCCTGCACCAGCAACAACTCCCACGACACCAACAACTCCAGTAACTCCGGTT
ACACCAACACCAAAACCAACAGGAGCTGCTTGGTGCATGCCAAAGCCGGGAACTCCTGAT
GCTGAATTACAGGCGAATCTTGACTATGCCTGTAGCCAGGCTGGAATCCTTGGAACTGCG
ACTTCTCTCAAACCGCTGCCCTCACCTCAACAAATCCTAGTTACGGTGGCTGTACTTATC
CTGGTGGCAGCTTATGACGCAGAGAATCTACTTTAG

Peptide Sequence

PEP ID

XP_016471080.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-D-glucosidase-like isoform X2 [Nicotiana tabacum]
Sequence

MATQKLSSFFLIFLVLLQSLSSAESQAFIGVNYGQLADNLPPVTETVKLIQSTRIEKVRL
YGADPAIIKALANTGIGIVIGAANGDIPALASDPNYAGQWVNSNVLAYYPASKIIVVTVG
NEVVTSGDQNLIPQLLPAMQNVQNALNAASLGGKIKVSTVHAMSILSQSDPPSSGLFSPV
FGDTLKALLQFHKENGSPLMINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGSGIKYMN
MFDAQVDAIHSALNAWGFKEVQIVVAETGWPYKGDPNEVGPSVDNAKAYNGNLINHLRSM
VGTPLMPGISVDTYIFALYDEDLKPGPGSERSFGLFKPDLSVTYDVGLSKNAQTPTAPVT
PVSPAPATTPTTPTTPVTPVTPTPKPTGAAWCMPKPGTPDAELQANLDYACSQAGILGTA
TSLKPLPSPQQILVTVAVLILVAAYDAENLL

Transcript Sequence

Gene sequence data has not been registered.